RNA Preprocessing Pipeline
Input Sequence:
5'-
CCCAACUGGGAUCAGU
-3'
One-Hot Encoding:
C
C
C
A
A
C
U
G
G
G
A
U
C
A
G
U
A
C
G
U
0
1
0
0
0
1
0
0
0
1
0
0
1
0
0
0
1
0
0
0
0
1
0
0
0
0
0
1
0
0
1
0
0
0
1
0
0
0
1
0
1
0
0
0
0
0
0
1
0
1
0
0
1
0
0
0
0
0
1
0
0
0
0
1
Base Pair Probability Matrix
C
C
C
A
A
C
U
G
G
G
A
U
C
A
G
U
C
C
C
A
A
C
U
G
G
G
A
U
C
A
G
U
> 0.7
> 0.5
> 0.3
> 0
Darker colors indicate higher probability of base pairing between nucleotides